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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903755.1_cds_XP_016453893.1_47977
CDS Infomation

[gene=LOC107778194] [db_xref=GeneID:107778194] [protein=carbamoyl-phosphate synthase small chain, chloroplastic-like isoform X2] [protein_id=XP_016453893.1] [location=join(88905..89037,89956..90088,91690..91778,91861..91921,92000..92067,92166..92294,92385..92494,92577..92924,93142..93307,94206..94255)] [gbkey=CDS]
Sequence

ATGGATTTTGCCATTACGAGTCAGAATCCATTGTCAACCACGACAATAACCAGCGCGTTG
TTTTCTAATAAAAAATCTGCAAATTTTAGGGTTTTCACTGTTAGATGTTCTTCTAAAACC
CTCTCCTCTGATGGTCTTGTTGAAAGACCATGGAAGGTAGCAGATGCTAGACTTGTTCTC
GAAGATGGTTCAATTTGGAAGGCCAAATCATTTGGTGCTTCTGGAACCCAAGTTGGAGAA
GTTGTTTTTAATACATCTTTAACTGGGTATCAGGAGATCCTTACAGATCCCAGTTATGCG
GGCCAGTTTGTCTTGATGACTAACCCTCATATCGGGAATACTGGCGTCAATTTTGGCGAT
GAAGAATCGATGCAGTGCTTTCTTGCAGGATTAGTCATTAGAAGTTTAAGTATCAGCACC
TCAAATTGGAGATGCAAAGAGACACTTGATGACTATTTGGCTAAAAGGAACATCATGGGT
ATATATGATGTAGACACTCGTGCAATTACGCGAAGATTGAGACAAGACGGAAGCCTCATT
GGAGTCCTGAGCACGGAAAATTCAAAAAGTGATGAAGAACTTCTCGAAATGTCTCGTACA
TGGGACATAGTGGGTGTGGATTTAATCAGTGGTGTTTCATGCAAATCTCCTTATGAATGG
GTTGATAGAACAGCCTCAGATTGGGATTTTAATGATAATGGAAGAAATAAAGAAACTTTT
AATGTTGTTGCATATGATTTTGGAATCAAGCATAATATACTTCGGCGCTTAGCATCCTAT
GGCTGTAAAATCACTGTTGTTCCTTCAACATGGCCAGCGTCTGAAACTCTAAAAATGAAA
CCTGATGGGGTTCTCTTCAGCAATGGGCCAGGAGATCCCTCTGCAGTTCCCTATGCAGTT
GAAGCAGTAAAAGAACTTATTGGAAAAGTTCCTGTTTTTGGCATTTGTATGGGTCACCAG
TTACTTGGTCAAGCATTGGGGGGTAAGACATTCAAAATGAAATTTGGTCATCATGGAGGA
AATCATCCAGTTCGAAACCTTCGAAATGGCTGCGTCGAGATCAGTGCTCAGAATCACAAC
TATGCTGTTGACCCTGAGTCTCTTCCAGAAGGTGTAGAAGTGACTCATGTAAATTTAAAT
GATGGAAGTTGTGCTGGTCTTGCCTCCTTTAAAATGAAGCTGATGTCACTTCAATACCAT
CCCGAAGCATCTCCAGGGCCTCATGATTCAGATCCTGTATTTGGGGAATTTATACAACTT
ATGAAGCAAGAAAAAGTGACGGCATAA

Peptide Sequence

PEP ID

XP_016453893.1
PEP Infomation

PREDICTED: carbamoyl-phosphate synthase small chain, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MDFAITSQNPLSTTTITSALFSNKKSANFRVFTVRCSSKTLSSDGLVERPWKVADARLVL
EDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFGD
EESMQCFLAGLVIRSLSISTSNWRCKETLDDYLAKRNIMGIYDVDTRAITRRLRQDGSLI
GVLSTENSKSDEELLEMSRTWDIVGVDLISGVSCKSPYEWVDRTASDWDFNDNGRNKETF
NVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSNGPGDPSAVPYAV
EAVKELIGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLRNGCVEISAQNHN
YAVDPESLPEGVEVTHVNLNDGSCAGLASFKMKLMSLQYHPEASPGPHDSDPVFGEFIQL
MKQEKVTA

Transcript Sequence

Gene sequence data has not been registered.